NA-MIC Project Weeks

These are notes from the Project Week Preparation Meetings.

Meeting #7: Jun 05

• Review of projects.
• Review of the breakout sessions proposal.
• Agenda update. Social events will be confirmed tomorrow.
• Meeting on June, 06. Simon Drouin. Topic: OpenIGTLinkIO Development. 9:00 am Boston time. Zoom link: https://zoom.us/j/6500546712

Meeting #6: May 29

• Review of projects.
• Proposal of breakout sessions.
• Agenda update. Still some social events to confirm.

Meeting #5: May 22

• Review of projects.
• Proposal to obtain new data sets.
• Proposal to held a “segment editor tutorial” for the next meeting. Still to confirm.

Meeting #4: May 15

• Its been held as a Slicer hangout. Announced and associated link: https://discourse.slicer.org/t/weekly-hangout-for-slicer-user-and-developer/53/85?u=jcfr

Meeting #3: May 08

• Brief review of the assistant’s projects: Francisco Marcano (Spectroscopy with MRI and infrared), Simon D. (3D printing), Till, Luke and James (segmentation), Paolo (Containers). It will be interesting to propose a “segment editor” session.
• Pages to check about MRI and spectroscopy projects:
  • https://sourceforge.net/p/sivic/sivicwiki/Home/
  • https://na-mic.org/wiki/2011_Winter_Project_Week:MRSI_module_and_SIVIC_interface
  • https://github.com/SIVICLab/sivic/tree/master/applications/slicer_plugin/MRSpectroscopy
• To include the MACbioIDi project parallel agenda in google calendar.
• To write a few lines about the projects proposed. They should be ready next week.
• The project git pages deadline is may, 28th.

Meeting #2: May 01

Topic: Segmentation

• Segmentation tasks using slicer.
• Introduction to some projects:
  • Efficient approach to the automatization of segmentation tasks. It could have some interest the use of CIP module Body composition.
  • The use of CIP with tuberculosis cases, some of them provided by the African countries.
  • Tuberculosis portal
  • Effective loading of data, and for this, to analyze how data are structured.
  • Deployment of a container with different dataset of images.
• Update of the project week mailing list.

Meeting #1: April 24

• Tina’s brief introduction of zoom and the host of a meeting.
• Juan’s presentation of the venue, hotels, some logistics and the African countries involved in the MACbioIDi project.
• Presentation of each participant interests.
• Mike’s proposal of a breakout session
• It could be interesting to discuss about the creation a segmentation-only slicelet for Slicer, kind of ITK-Snap style, which novices can start to use very easily.
• Next hangout topic: Segmentation.